[Skip to Navigation]
Sign In
August 3, 2009

Role of Staphylococcus aureus Nasal Colonization in Atopic Dermatitis in Infants: The Generation R Study

Author Affiliations

Author Affiliations: Generation R Study Group (Drs Labout, Jaddoe, Hofman, and Moll and Ms Lebon) and Departments of Medical Microbiology and Infectious Diseases (Drs Verbrugh, van Wamel, and van Belkum and Ms Lebon) and Epidemiology (Drs Jaddoe and Hofman), Erasmus Medical Center, and Department of Pediatrics, Erasmus Medical Center–Sophia Children's Hospital (Drs Labout, Jaddoe, and Moll and Ms Lebon), Rotterdam, the Netherlands.

Arch Pediatr Adolesc Med. 2009;163(8):745-749. doi:10.1001/archpediatrics.2009.117

Objective  To study the association between Staphylococcus aureus nasal colonization and atopic dermatitis (AD) in infancy.

Design  Population-based prospective cohort study of pregnant women and their children.

Setting  This project was embedded in the Generation R Study.

Participants  A total of 1079 postnatal Dutch infants/children participated in the focus cohort.

Main Exposures  Nasal swabs for S aureus cultivation were taken at ages 1.5, 6, and 14 months.

Main Outcome Measure  Questionnaires that pertain to AD and confounders (birth weight, gestational age, sex, and parental eczema) were completed prenatally and postnatally. The outcome was AD in the first and second years of life.

Results  A first positive culture for S aureus at age 6 months was associated with AD prevalence in the first and second years of life (adjusted odds ratio [aOR], 2.13; 95% confidence interval [CI], 1.17-3.87; and aOR, 2.88; 95% CI, 1.60-5.19, respectively) and also with severity (aOR, 3.27; 95% CI, 1.30-8.03). Moreover, frequent colonization in the first year of life (≥2 times) held a 4.29-fold (95% CI, 1.03- to 17.88-fold) risk of moderate to severe AD in the second year of life.

Conclusion  Colonization with S aureus at age 6 months and frequent colonization in the first year of life are associated with AD and its severity in young children.

Staphylococcus aureus is a commensal organism in humans and the cause of a wide range of infections. Besides its role in several invasive diseases, it plays an important role in cutaneous diseases, including atopic dermatitis (AD),1-3 an inflammatory skin disease that usually presents itself in the first years of life.4,5 As reported in many studies, S aureus is the most important pathogen associated with AD. Skin colonization with S aureus is known to be related to AD disease severity.6

A significant fraction of the healthy population is colonized with S aureus on epithelial surfaces, of which the anterior nares are the most frequent carriage sites.1,7,8 Longitudinal studies9-12 distinguish three carriage patterns in healthy adults: noncarriers, intermittent carriers, and persistent carriers. Persistent carriers have a well-documented higher risk of S aureus infection, but those carriers barely exist among the infant population.13-16 The anterior nares may serve as an important endogenous reservoir for involvement in AD, reaching a colonization prevalence of 39% to 82% in adult patients with AD.17,18Staphylococcus aureus might play a role in the chronicity and severity of AD through its release of superantigenic exotoxins.19 Specifically, colonization with superantigen-producing S aureus is associated with increased severity of AD. Staphylococcus aureus enterotoxins A through E and toxic shock syndrome toxin 1, which act as superantigens, have been shown to trigger AD occurrence and severity.20,21Staphylococcus aureus enterotoxins22 increase inflammation in AD and provoke the generation of enterotoxin-specific IgE, which correlates with the severity of the disease.19,23,24

Longitudinal data on nasal colonization with S aureus in infancy were recently described.16 In addition, we aim to assess the risk of AD after nasal colonization with S aureus in healthy infants in the first year of life.


Study design and population

This project was embedded in the Generation R Study, a population-based prospective cohort study of pregnant women and their infants/children. Detailed assessments were conducted with 1232 pregnant Dutch women and their infants/children. Three infants died perinatally. The remaining mothers gave birth to 1244 infants, of whom 138 were excluded because consent was withdrawn after birth. Twins (n = 27) were excluded because they are related, which leaves 1079 infants in the group of postnatal participants. All the children were born between February 1, 2003, and August 1, 2005.25,26 The medical ethics committee of the Erasmus Medical Center approved the study. Written informed consent was obtained from all the participants.26

The infants/children visited the Generation R Study center at age 1.5 months (n = 884), 6 months (n = 882), and 14 months (n = 863). At each visit, nasal samples for S aureus isolation were collected: 627 infants had a swab taken at age 1.5 months, 832 at age 6 months, and 757 children at age 14 months. A total of 758 infants/children attended all the visits; 443 provided 3 swabs to use for longitudinal analysis. The number of infants with a swab at age 1.5 months is considerably lower than at the other visits owing to a later start of swab sampling as part of the visit to the research center. None of the infants/children had used antibiotic drugs in the preceding 48 hours.


Research nurses obtained a nasal swab for S aureus isolation at each visit. Nasal samples were taken by the use of a swab that was rubbed through the nostrils. The methods of sampling had been described in more detail previously.16 Colonization with S aureus was analyzed at 1.5, 6, and 14 months of age. In addition, we assessed the importance of the first positive culture result. To assess the importance of frequent S aureus colonization in the first year of life on the development of AD, 3 groups of infants were created: never positive, positive once, and positive twice or more.

Exposures and covariates

Information about date of birth, birth weight, and sex was obtained from midwives and from hospital registries. Gestational age was based on pregnancy dating by means of early ultrasound. Information on parental history of eczema was obtained via prenatal questionnaires.

Atopic dermatitis

Information that pertains to AD was obtained by the use of an age-adapted version of the validated questionnaire of the International Study of Asthma and Allergies in Childhood at ages 12 and 24 months.27,28 Parents were asked questions that pertain to previous episodes of eczema, AD treatment, and episodes of itchy rash. These categories were combined to define a dichotomous outcome: presence or absence of AD in the first and the second years of life. The severity score was based on questions that pertain to the level of suffering. Questions related to continuous or intermittent rash, rash clearance, and whether infants were kept awake because of the itchy rash. This resulted in 3 groups: no AD, mild AD (episode of rash without additional symptoms), and moderate to severe AD (episode of rash with additional symptoms).

Data analyses

We compared the 443 infants with all 3 swabs available with the total cohort of 1079 infants available for postnatal analysis. To study the association between colonization and AD in the first and the second years of life, we performed univariate and multivariate binary logistic regression, adjusted for important confounders such as sex, gestational age, birth weight, and parental history of eczema. To study the association between colonization and severity of AD in the second year of life, we conducted multinomial logistic regression analyses, univariate and multivariate. Infants with missing data for the outcome variable were excluded from the analyses (11.2% of 1079 infants); missing data for the confounders were analyzed in the model as a separate category and, thus, were accounted for in the analyses. Measures of association are presented by crude odds ratios (ORs) and adjusted ORs (aORs) with 95% confidence intervals (CIs). Statistical analyses were performed by the use of a commercially available software program (SPSS version 11.0 for Windows; SPSS Inc, Chicago, Illinois).


Table 1 provides characteristics of infant/child participants and their parents. Of the 1079 participants, 48.3% were girls (n = 521), mean (SD) birth weight was 3509 (538) g, and median gestational age was 40.3 weeks (95% range, 37.1-42.1 weeks). Eczema symptoms occurred in 3.4% of the mothers (n = 32) and in 4.4% of the fathers (n = 39). In the period of 6 to 12 months of age, 259 of 1079 participants (24.0%) experienced AD symptoms. A total of 273 of 1079 infants (25.3%) participants experienced AD in the second year of life (Table 1).

Table 1. 
Population Descriptivea
Population Descriptivea

Table 2 shows the multivariate analyses. Colonization with S aureus at 6 months was associated with AD in the first and the second years of life (aOR, 1.67; 95% CI, 1.15-2.44; and aOR, 1.86; 95% CI, 1.28-2.69, respectively). Participants with their first positive swab result at age 6 months (a negative swab result at 1.5 months) had an even greater increased risk of AD symptoms in the first (aOR, 2.13; 95% CI, 1.17-3.87) and second (aOR, 2.88; 95% CI, 1.60-5.19) years of life. Participants with a higher frequency of colonization in the first year of life (≥2) had an increased risk of AD in the second year of life (OR, 2.00; 95% CI, 1.10-3.63), and this effect remained significantly associated after adjustment for confounders (aOR, 2.03; 95% CI, 1.10-3.74).

Table 2. 
Association Between Staphylococcus aureus Colonization and Atopic Dermatitis in Infancy/Childhooda
Association Between Staphylococcus aureus Colonization and Atopic Dermatitis in Infancy/Childhooda

Of the 273 children with AD in the second year of life, 55 (20.1%) had moderate to severe AD and 218 had a mild phenotype (79.9%) (Table 3). Colonization with S aureus was also correlated with severity of AD. Infants colonized at age 6 months had an increased risk of mild and moderate to severe AD in the second year of life. However, a higher risk was found for those with moderate to severe AD (aOR, 3.27; 95% CI, 1.30-8.03) compared with mild AD (aOR, 1.57; 95% CI, 1.04-2.37). Frequent S aureus colonization in the first year of life (≥2 times) was associated with moderate to severe AD symptoms (aOR, 4.29; 95% CI, 1.03-17.88) but not with mild AD (aOR, 1.71; 95% CI, 0.89-3.31) in the second year of life.

Table 3. 
Staphylococcus aureus Colonization and Atopic Dermatitis Severity in the Second Year of Life
Staphylococcus aureus Colonization and Atopic Dermatitis Severity in the Second Year of Life

An additional analysis was performed to assess whether infants with AD in the first year of life have an increased risk of colonization as a result. We did not find a significant association between AD in the first year of life and S aureus colonization at age 14 months.

Because we selected 443 of 1079 infants for a part of the analyses, selection bias may have occurred. Overall, looking at the differences between the selected 443 infants with 3 swabs available and the total cohort of 1079 infants, the selected infants had fewer missing data from the questionnaires. The infants without 3 swabs available were more likely to have filled out the questionnaire incompletely or not at all.

Of the 443 selected participants, 26.0% had AD in the first year of life and 23.3% in the second year of life. We missed data that pertain to AD symptoms for 6.1% and 4.3% in this selected group. Of the remaining participants in the total cohort (n = 636), 22.6% and 26.7% experienced AD in the first and second years of life, respectively, and data were missing for 13.7% and 16.0% in the first and second years of life, respectively. The eczema history of the mother was similar in the group of 443 participants as from the total cohort (82.8% and 83.3%, respectively). Missing data were fairly equal in these groups (15.1% vs 13.1%), contrary to the eczema history of the fathers, which was missing more often in the total cohort vs the selected group (21.7% vs 12.2%).


Bacterial colonization is considered to be an important factor in the pathogenesis of AD.29 We found a clear association, after adjustment for important confounders, between the prevalence of S aureus nasal colonization at 6 months of age and the occurrence of AD in the first and second years of life in a healthy cohort. Moreover, frequent nasal colonization with S aureus in the first year of life held an increased risk of AD in the second year of life; this risk was especially increased in moderate to severe AD. This finding is in line with previous studies that show a relationship between S aureus and AD in several ways. Semic-Jusufagic et al24 showed, in a similar cohort study, a positive association between specific IgE staphylococcal enterotoxin mix and AD in children. Other studies21,30 reported increased levels of antistaphylococcal IgE and staphylococcal toxins A to E in the serum of patients with AD. No other studies, to our knowledge, have reported on nasal colonization of S aureus as a risk factor that precedes AD in infants.

Colonization at age 6 months may be a critical event in the development of the immune system of infants. Barely any immunoglobulins from the mother are left at this age, and the immune system of the infant is still developing. It, therefore, is important to take this moment in the first year of life into account during the study of bacterial colonization and the development of AD in childhood.

We found that the severity of AD was associated with S aureus nasal colonization. Infants who test positive at age 6 months have not only an increased risk of AD but also a significant increased risk of moderate to severe AD compared with noncarriers. Moreover, a more than 4-fold risk was found in this cohort for participants with at least 2 instances of S aureus colonization in the first year of life. This result is additional to data pertaining to severity presented by other researchers.24 Several studies24,31,32 describe an association between colonization and a higher eczema severity score.

This study provides data that pertain to nasal colonization of S aureus that precedes AD adjusted for several confounders, which support a direct link between colonization and AD in one of the largest birth cohorts to be studied. In our study, 443 was the smallest number of infants with all 3 swabs available: this number is large compared with the numbers from other studies of its kind. A larger sample was studied for the individual swab results. Selection bias may have occurred by the choice to analyze 443 infants of the total cohort of 1079. These 443 infants were selected based on their attendance at the research center and willingness to provide a nasal swab. One can speculate whether these are children with fewer or more physical problems. Either the parents may be more willing to participate when their child is ill or medical care is sought in different ways when the child is too ill to participate, with the implication that study participation in that instance is not wanted by the parents. However, because we do not see great differences in AD prevalence between the selected 443 participants and the total cohort, selection by AD is not likely to have happened. It could be the case for other illnesses and infections, and selection bias by socioeconomic status may have occurred.

In addition to the analyses of bacterial colonization that precede episodes of AD, we also analyzed bacterial colonization after an episode of AD in the first year of life, which showed no significance. This result allows us to draw conclusions that pertain to AD after bacterial colonization with S aureus rather than the other way around.

Symptoms of AD were not confirmed by any of the physicians in this study. However, the questionnaire used was validated and age adapted.27,28 Information bias owing to knowledge of the main determinant is unlikely to have occurred because the parents, who filled out the questionnaire that pertains to AD and confounders, were not notified of the colonization status of their infants.

We did not study methicillin-resistant S aureus (MRSA) colonization in this study. Not only was this phenomenon outside the scope of this study, but the prevalence of MRSA in the Netherlands is among the lowest in the world.33 To study MRSA in a Dutch population cohort would not be very important. Nasal colonization and colonization of the affected skin in patients with AD are strongly associated, which may explain a pathophysiologic role for S aureus nasal colonization and AD.34 One can speculate about a systemic release of enterotoxin-specific IgE against superantigens of S aureus that could lead to AD.

These results are in line with, and in addition to, literature that suggests a potentially pathophysiologic role for S aureus in AD.24,29 Further studies are required to clarify the exact pathophysiologic role of S aureus colonization in relation to AD.

Correspondence: Henriëtte A. Moll, MD, PhD, Department of Pediatrics, Erasmus Medical Center–Sophia Children's Hospital, University Medical Center, PO Box 2060, 3000 CB Rotterdam, the Netherlands (h.a.moll@erasmusmc.nl).

Accepted for Publication: February 3, 2009.

Author Contributions: All authors had full access to all the data in the study and take responsibility for the integrity of the data, the accuracy of the data analysis, and the decision to submit for publication. Study concept and design: Lebon, Labout, Verbrugh, Jaddoe, Hofman, van Wamel, van Belkum, and Moll. Acquisition of data: Lebon, Labout, Jaddoe, and Hofman. Analysis and interpretation of data: Lebon, van Belkum, and Moll. Drafting of the manuscript: Lebon. Critical revision of the manuscript for important intellectual content: Lebon, Labout, Verbrugh, Jaddoe, Hofman, van Wamel, van Belkum, and Moll. Statistical analysis: Lebon, Labout, and Jaddoe. Obtained funding: Hofman and Moll. Administrative, technical, or material support: Verbrugh, van Wamel, and van Belkum. Study supervision: Verbrugh, van Belkum, and Moll.

Financial Disclosure: None reported.

Funding/Support: The first phase of the Generation R Study was supported by the Erasmus Medical Center, the Erasmus University Rotterdam, and the Netherlands Organization for Health Research and Development (Zon Mw).

Role of the Sponsors: The funders had no role in the design of the study, the data collection and analyses, the interpretion of data, or the preparation of, review of, and decision to submit the manuscript.

Additional Contributions: The Generation R Study is conducted by the Erasmus Medical Center in close collaboration with the School of Law and Faculty of Social Sciences of the Erasmus University Rotterdam, the Municipal Health Service–Rotterdam Metropolitan Area, the Rotterdam Homecare Foundation, and the Stichting Trombosedienst & Artsenlaboratorium Rijnmond. We acknowledge the contributions of the general practitioners, hospitals, midwives, and pharmacies in Rotterdam. Ad Luijendijk, BSc, provided technical supervision at the Department of Medical Microbiology and Infectious Diseases, Erasmus Medical Center.

Wertheim  HFMelles  DCVos  MC  et al.  The role of nasal carriage in Staphylococcus aureus infections.  Lancet Infect Dis 2005;5 (12) 751- 762PubMedGoogle ScholarCrossref
Iwatsuki  KYamasaki  OMorizane  SOono  T Staphylococcal cutaneous infections: invasion, evasion and aggression.  J Dermatol Sci 2006;42 (3) 203- 214PubMedGoogle ScholarCrossref
El Helali  NCarbonne  ANaas  T  et al.  Nosocomial outbreak of staphylococcal scalded skin syndrome in neonates: epidemiological investigation and control.  J Hosp Infect 2005;61 (2) 130- 138PubMedGoogle ScholarCrossref
Schultz Larsen  F The epidemiology of atopic dermatitis.  Monogr Allergy 1993;319- 28PubMedGoogle Scholar
Rajka  G Natural history and clinical manifestations of atopic dermatitis.  Clin Rev Allergy 1986;4 (1) 3- 26PubMedGoogle Scholar
Machura  EMazur  BGolemiec  EPindel  MHalkiewicz  F Staphylococcus aureus skin colonization in atopic dermatitis children is associated with decreased IFN-γ production by peripheral blood CD4+ and CD8+ T cells.  Pediatr Allergy Immunol 2008;19 (1) 37- 45PubMedGoogle Scholar
Kluytmans  JAWertheim  HF Nasal carriage of Staphylococcus aureus and prevention of nosocomial infections.  Infection 2005;33 (1) 3- 8PubMedGoogle ScholarCrossref
Casewell  MWHill  RL Elimination of nasal carriage of Staphylococcus aureus with mupirocin (“pseudomonic acid”): a controlled trial.  J Antimicrob Chemother 1986;17 (3) 365- 372PubMedGoogle ScholarCrossref
VandenBergh  MFQYzerman  EPFvan Belkum  ABoelens  HAMSijmons  MVerbrugh  HA Follow-up of Staphylococcus aureus nasal carriage after 8 years: redefining the persistent carrier state.  J Clin Microbiol 1999;37 (10) 3133- 3140PubMedGoogle Scholar
Nouwen  JLOtt  AKluytmans-Vandenbergh  MFQ  et al.  Predicting the Staphylococcus aureus nasal carrier state: derivation and validation of a “culture rule.”  Clin Infect Dis 2004;39 (6) 806- 811PubMedGoogle ScholarCrossref
Kluytmans  Jvan Belkum  AVerbrugh  H Nasal carriage of Staphylococcus aureus: epidemiology, underlying mechanisms, and associated risks.  Clin Microbiol Rev 1997;10 (3) 505- 520PubMedGoogle Scholar
Eriksen  NHEspersen  FRosdahl  VTJensen  K Carriage of Staphylococcus aureus among 104 healthy persons during a 19-month period.  Epidemiol Infect 1995;115 (1) 51- 60PubMedGoogle ScholarCrossref
White  A Increased infection rates in heavy nasal carriers of coagulase-positive staphylococci.  Antimicrob Agents Chemother (Bethesda) 1963;161667- 670PubMedGoogle Scholar
Calia  FMWolinsky  EMortimer  EA  JrAbrams  JSRammelkamp  CH  Jr Importance of the carrier state as a source of Staphylococcus aureus in wound sepsis.  J Hyg (Lond) 1969;67 (1) 49- 57PubMedGoogle ScholarCrossref
Bruun  JN Post-operative wound infection: predisposing factors and the effect of a reduction in the dissemination of staphylococci.  Acta Med Scand Suppl 1970;5143- 89PubMedGoogle Scholar
Lebon  ALabout  JAMVerbrugh  HA  et al.  Dynamics and determinants of Staphylococcus aureus carriage in infancy: the Generation R Study.  J Clin Microbiol 2008;46 (10) 3517- 3521PubMedGoogle ScholarCrossref
Aly  RMaibach  HIShinefield  HR Microbial flora of atopic dermatitis.  Arch Dermatol 1977;113 (6) 780- 782PubMedGoogle ScholarCrossref
Roth  HL Atopic dermatitis revisited.  Int J Dermatol 1987;26 (3) 139- 149PubMedGoogle ScholarCrossref
Leung  DYHarbeck  RBina  P  et al.  Presence of IgE antibodies to staphylococcal exotoxins on the skin of patients with atopic dermatitis: evidence for a new group of allergens.  J Clin Invest 1993;92 (3) 1374- 1380PubMedGoogle ScholarCrossref
Campbell  DEKemp  AS Production of antibodies to staphylococcal superantigens in atopic dermatitis.  Arch Dis Child 1998;79 (5) 400- 404PubMedGoogle ScholarCrossref
Tomi  NSKranke  BAberer  E Staphylococcal toxins in patients with psoriasis, atopic dermatitis, and erythroderma, and in healthy control subjects.  J Am Acad Dermatol 2005;53 (1) 67- 72PubMedGoogle ScholarCrossref
Cardona  IDCho  SHLeung  DY Role of bacterial superantigens in atopic dermatitis: implications for future therapeutic strategies.  Am J Clin Dermatol 2006;7 (5) 273- 279PubMedGoogle ScholarCrossref
Bunikowski  RMielke  MSkarabis  H  et al.  Prevalence and role of serum IgE antibodies to the Staphylococcus aureus–derived superantigens SEA and SEB in children with atopic dermatitis.  J Allergy Clin Immunol 1999;103 (1, pt 1) 119- 124PubMedGoogle ScholarCrossref
Semic-Jusufagic  ABachert  CGevaert  P  et al.  Staphylococcus aureus sensitization and allergic disease in early childhood: population-based birth cohort study.  J Allergy Clin Immunol 2007;119 (4) 930- 936PubMedGoogle ScholarCrossref
Jaddoe  VWMackenbach  JPMoll  HA  et al.  The Generation R Study: design and cohort profile.  Eur J Epidemiol 2006;21 (6) 475- 484PubMedGoogle ScholarCrossref
Jaddoe  VWVBakker  Rvan Duijn  CM  et al.  The Generation R Study Biobank: a resource for epidemiological studies in children and their parents.  Eur J Epidemiol 2007;22 (12) 917- 923PubMedGoogle ScholarCrossref
Asher  MIKeil  UAnderson  HR  et al.  International Study of Asthma and Allergies in Childhood (ISAAC): rationale and methods.  Eur Respir J 1995;8 (3) 483- 491PubMedGoogle ScholarCrossref
Caudri  DWijga  AGehring  U  et al.  Respiratory symptoms in the first 7 years of life and birth weight at term: the PIAMA Birth Cohort.  Am J Respir Crit Care Med 2007;175 (10) 1078- 1085PubMedGoogle ScholarCrossref
Williams  JVVowels  BRHonig  PJLeyden  JJ S. aureus isolation from the lesions, the hands, and the anterior nares of patients with atopic dermatitis.  Pediatr Dermatol 1998;15 (3) 194- 198PubMedGoogle ScholarCrossref
Falanga  VCampbell  DELeyden  JJDouglas  SD Nasal carriage of Staphylococcus aureus and antistaphylococcal immunoglobulin E antibodies in atopic dermatitis.  J Clin Microbiol 1985;22 (3) 452- 454PubMedGoogle Scholar
Lomholt  HAndersen  KEKilian  M Staphylococcus aureus clonal dynamics and virulence factors in children with atopic dermatitis.  J Invest Dermatol 2005;125 (5) 977- 982PubMedGoogle ScholarCrossref
Hon  KLELam  MCALeung  TF  et al.  Clinical features associated with nasal Staphylococcus aureus colonisation in Chinese children with moderate-to-severe atopic dermatitis.  Ann Acad Med Singapore 2005;34 (10) 602- 605PubMedGoogle Scholar
Tiemersma  EWBronzwaer  SLAMLyytikäinen  O  et al. European Antimicrobial Resistance Surveillance System Participants, Methicillin-resistant Staphylococcus aureus in Europe, 1999-2002.  Emerg Infect Dis 2004;10 (9) 1627- 1634PubMedGoogle ScholarCrossref
Gilani  SJKGonzalez  MHussain  IFinlay  AYPatel  GK Staphylococcus aureus re-colonization in atopic dermatitis: beyond the skin.  Clin Exp Dermatol 2005;30 (1) 10- 13PubMedGoogle ScholarCrossref